By Evgeny Katz
Chapter 1 Biomolecular Computing: From Unconventional Computing to “Smart” Biosensors and Actuators – Editorial creation (pages 1–8): Prof. Dr. Evgeny Katz
Chapter 2 Peptide?Based Computation: Switches, Gates, and easy mathematics (pages 9–32): Zehavit Dadon, Manickasundaram Samiappan, Nathaniel Wagner, Nurit Ashkenasy and Gonen Ashkenasy
Chapter three Biomolecular Electronics and Protein?Based Optical Computing (pages 33–59): Jordan A. Greco, Nicole L. Wagner, Matthew J. Ranaghan, Sanguthevar Rajasekaran and Robert R. Birge
Chapter four Bioelectronic units managed via Enzyme?Based info Processing platforms (pages 61–80): Prof. Dr. Evgeny Katz
Chapter five Enzyme good judgment electronic Biosensors for Biomedical functions (pages 81–101): Prof. Dr. Evgeny Katz and Joseph Wang
Chapter 6 info defense functions in accordance with Biomolecular structures (pages 103–116): Guinevere Strack, Heather R. Luckarift, Glenn R. Johnson and Prof. Dr. Evgeny Katz
Chapter 7 Biocomputing: discover Its recognition and clever common sense Detection (pages 117–131): Ming Zhou and Shaojun Dong
Chapter eight a few Experiments and versions in Molecular Computing and Robotics (pages 133–143): Milan N. Stojanovic and Darko Stefanovic
Chapter nine Biomolecular Finite Automata (pages 145–179): Tamar Ratner, Sivan Shoshani, Ron Piran and Ehud Keinan
Chapter 10 In Vivo info Processing utilizing RNA Interference (pages 181–198): Yaakov Benenson
Chapter eleven Biomolecular Computing structures (pages 199–223): Harish Chandran, Sudhanshu Garg, Nikhil Gopalkrishnan and John H. Reif
Chapter 12 Enumeration method of the research of Interacting Nucleic Acid Strands (pages 225–244): Satoshi Kobayashi and Takaya Kawakami
Chapter thirteen restrict Enzymes in Language iteration and Plasmid Computing (pages 245–263): Tom Head
Chapter 14 improvement of Bacteria?Based mobile Computing Circuits for Sensing and keep an eye on in organic structures (pages 265–277): Michaela A. Teravest, Zhongjian Li and Largus T. Angenent
Chapter 15 The good judgment of selection Making in Environmental micro organism (pages 279–302): Rafael Silva?Rocha, Javier Tamames and Victor de Lorenzo
Chapter sixteen Qualitative and Quantitative features of a version for approaches encouraged through the Functioning of the dwelling phone (pages 303–321): Andrzej Ehrenfeucht, Jetty Kleijn, Maciej Koutny and Grzegorz Rozenberg
Chapter 17 Computational tools for Quantitative Submodel comparability (pages 323–346): Andrzej Mizera, Elena Czeizler and Ion Petre
Chapter 18 Conclusions and views (pages 347–350): Prof. Dr. Evgeny Katz
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Additional info for Biomolecular Information Processing: From Logic Systems to Smart Sensors and Actuators
The caged molecule destabilizes the coiled-coil structure and abolishes its availability as a catalyst for replication. 8) . We expanded this system to a network by synthesizing two new nucleophilic fragments, Naa and Nz , which compete together with N for ligation to E as a common reactant. The formation of each of the three products, T, Taa , and Tz , was analyzed in the dark and after shining light. 8a). 8 Light-induced selection in small networks. (a) A ternary network under illumination.
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We have further assumed that the rate constants describing these reactions obey reasonable chemical assumptions. , independent of template) bij ≈ bi ≈ kbg (i)gi . Furthermore, we assumed based on experimental systems that the dissociation constants and d, in ﬁrst-order catalysis, and and f, in second-order catalysis, are proportional (at least by order of magnitude), where the constant of proportionality depends only on i (reactant) and not on j or k (template). We call this the ‘‘Broken Lego Property’’; roughly, it is equivalent to assuming that the relative bond strengths of approximately matching lego pieces, where some are partially broken, are determined only by the broken ones .